Literature

Publications:

HONISCH, C., ET AL. (2007). “Automated comparative sequence analysis by base – specific cleavage and mass spectrometry for nuclei acid- based microbial typing.” Proc Natl Acad Sci USA 104(25): 10649-54.

HERRING, C.D., ET AL. (2006). “Comparative genome sequencing of Escherichia coli allows observation of bacterial evolution on a laboratory timescale.” Nat Genet 38(12): 1406-12

STURENBURG. E., ET AL. (2006). “Detection and genotyping of SHV beta-lactamase variants by mass spectrometry after base - specific cleavage of in vitro - generated RNA transcripts.” J Clin Microbiol 44(3): 909-15

EHRICH, M., ET AL. (2005). Multiplexed discovery of sequence polymorphisms using base - specific cleavage and MALDI-TOF MS.” Nucleic Acids Res 33(4): e38.

LIU, J., ET AL. (2005). “SARS transmission pattern in Singapore reassessed by viral sequence variation analysis.” PLoS Med 2(2): e43.

HONISCH, C., ET AL. (2004). “High-throughput mutation detection underlying adaptive evolution of Escherichia coli-K12.” Genome Res 14(12): 2495-502.

LEFMANN, M., ET AL. (2004). “Novel mass spectrometry-based tool for genotypic identification of mycobacteria.” J Clin Microbiol 42(1): 339-46.

SMYLIE, K.J., ET AL. (2004). “ Analysis of sequence variations in several human genes using phosphoramidite bond DNA fragmentation and chip-based MALDI-TOF.” Genome Res 14(1): 134-41.

STANSSENS, P., ET AL. (2004). “High-throughput MALDI-TOF discovery of genomic sequence polymorphisms.” Genome Res 14(1): 126-33.

HARTMER, R., ET AL. (2003). “RNase T1 mediated base – specific cleavage and MALDI-TOF MS for high-throughput comparative sequence analysis.” Nucleic Acids Res 31(9): e47.

BOCKER, S., ET AL. (2003). “SNP and mutation discovery using base-specific cleavage and MALDI-TOF mass spectrometry.” Bioinformatics 19 Suppl 1: i33-53

VON WINTZINGERODE, ET AL. (2002). “Base – specific fragmentation of amplified 16S rRNA genes analyzed by mass spectrometry: a tool for rapid bacterial identification.” Proc Natl Acad Sci USA 99(10): 7039-44

AMEXIS, G., ET AL. (2001). “Quantitative mutant analysis of viral quasispecies by chip–based matrix–assisted laser desorption / ionization time-of-flight mass spectrometry.” Proc Natl Acad Sci USA 98(21): 12097 – 102.

SHCEPINOV, M.S., ET AL. (2001). “Matrix-induced fragmentation of P3’N5’ phosphoramidate-containing DNA: high-throughput MALDI-TOF analysis of genomic sequence polymorphisms.” Nucleic Acids Res 29(18): 3864-72.